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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs8158 chr1:201112981 C/T 7.74E-6 407 15.25 15.63 9.28 KM Plot
LGG rs839776 chr6:27930636 G/A 1.62E-6 405 15.17 15.47 15.07 KM Plot
LGG rs8401 chr1:153533898 A/G 4.7E-5 407 15.35 13.83 17.75 KM Plot
LGG rs851035 chr6:35987222 A/G 0.00015 398 10.5 15.2 16.1 KM Plot
LGG rs851039 chr6:35985802 T/C 0.000156 397 10.5 15.18 16.1 KM Plot
LGG rs867970 chr10:14340708 C/T 0.000193 407 15.17 17 7.9 KM Plot
LGG rs874459 chr9:95449520 C/G 0.000148 407 15.17 17.7 7.12 KM Plot
LGG rs874469 chr16:67441762 G/A 6.24E-5 406 15.25 16.42 16.55 KM Plot
LGG rs879647 chr11:61205434 G/A 2.96E-5 407 17.73 17.67 14.5 KM Plot
LGG rs881423 chr10:33427023 A/G 1.38E-7 407 14.6 18.17 7.9 KM Plot
LGG rs888193 chr12:109987576 C/G 1.74E-5 407 11.8 17.67 15.17 KM Plot
LGG rs888842 chr5:156022936 T/C 2.71E-5 406 16.73 14.37 11.17 KM Plot
LGG rs90192 chr11:117059347 C/T 0.000165 407 7.53 15.93 15.15 KM Plot
LGG rs915877 chr21:45502844 A/C 1.8E-8 407 15.6 13.6 3.97 KM Plot
LGG rs921982 chr16:67461429 G/C 9.13E-6 406 15.2 15.25 19.2 KM Plot